Disease: Non-Small Cell Lung Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs9651118
MTHFR
0.683 0.480 1 11802157 intron variant T/C snv 0.18 20
rs941759532
ERCC4
0.763 0.240 16 13932175 missense variant C/G snv 11
rs931127
SIPA1 ; PCNX3
0.790 0.160 11 65637829 upstream gene variant G/A snv 0.49 12
rs895819
MIR23A ; LOC284454 ; MIR27A ; MIR24-2
0.623 0.560 19 13836478 non coding transcript exon variant T/A;C;G snv 0.34 0.38 46
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 113
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs7867494
RORB
0.882 0.120 9 74529284 intron variant A/G snv 0.27 6
rs781598341
SOD2
0.827 0.240 6 159682510 missense variant T/C snv 4.0E-06 5
rs781367751
LIG3
0.851 0.200 17 34991822 missense variant A/G snv 1.2E-05 4
rs776223836
ERCC2
0.763 0.280 19 45364045 missense variant G/A snv 11
rs774188914
ERCC5 ; BIVM-ERCC5
0.851 0.200 13 102858296 missense variant C/G snv 2.4E-05 1.4E-05 4
rs77375493
INSL6 ; JAK2
0.458 0.760 9 5073770 missense variant G/A;T snv 3.5E-04 187
rs768623239
GSTM1 ; GSTM2
0.662 0.640 1 109689278 missense variant A/G snv 1.5E-05 26
rs762846821
TP53
0.614 0.320 17 7675151 missense variant C/A;T snv 8.0E-06 57
rs759412116
ERCC2
0.581 0.640 19 45352210 missense variant C/G;T snv 4.0E-06; 6.0E-05 55
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs755174338
ERCC2
0.732 0.360 19 45364096 missense variant C/T snv 2.6E-05 1.4E-05 15
rs755024903
NLRP2
0.851 0.200 19 54983029 missense variant G/A;T snv 7.5E-05; 4.2E-06 4
rs751402
ERCC5 ; BIVM-ERCC5
0.724 0.360 13 102845848 5 prime UTR variant A/G snv 0.76 15
rs746965070
NBN
0.827 0.200 8 89955487 missense variant T/C snv 1.2E-05 5
rs733618
CTLA4
0.763 0.440 2 203866221 upstream gene variant T/C snv 0.10 12
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34 81